The issue was when you went to the search application you got the following.
Crawl: The search service is not able to connect to the machine that hosts the administration component. Verify that the administration component "systemname" status -
After checking that the SQL was up, the associated dbs were online (crawl,admin and property). And that the service account was associated.
So after checking a few links ( handy dandy google.) I tried somepowershell commands to check on the service
To remove some old Search Data
http://jshidell.com/2011/09/01/unable-to-remove-search-service-application-in-sharepoint-2010/
And removed the search service app pool plus some other app pools
http://jshidell.com/2011/09/01/removing-unused-service-application-app-pools-in-sharepoint-2010-using-powershell/